Introduction to Linux, HPC3 and R
Workshop Agenda Presentations
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Hands-on Workshop for bulk RNA-seq
Workshop Agenda Presentations (PDF)
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Single Cell RNA-seq Data Analysis Workshops
Workshop Agenda Presentations Intro to Single Cell RNA-seq Data Analysis, Jenny Wu, PhD(PDF version)(Video version) Downstream Analysis of Single Cell RNA-seq Data, Jenny Wu, PhD(PDF version)(Video version) Tools on HPC3 and 10X Cloud for scRNA-seq Data Primary Processing, Ivan Chang, PhD(PDF version)(Video version) Part 1(Video version) Part 2
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DNA Methylation Data Analysis Workshop
Workshop Agenda Presentations (PDFs) Presentations (Videos)
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Scalable Computing and Storage at UCI? What’s available. What’s new.
Phil Papadopoulos, PhD, Director of the Research Cyber Infrastructure Center Presentation Overview of RCIC Resources. Some New Things. And BACKUP your STUFF
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Spatial Transcriptomic Data Analysis & Software
Genomics Research and Technology Hub (GRT Hub) Workshop Required: Personal laptop (Mac or Windows) and HPC3 account Instructors: Jenny Wu, PhD and Ivan Chang, PhD This workshop introduces data analysis workflow with both sequencing and imaging based spatial transcriptomics platforms, using 10x Visium and Xenium as examples. The topics included an overview of data quality…
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What’s New in Genomics Technologies, Presented by GRT Hub Staff
GRT Hub Staff Presenting: Seminar Recording
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Bioinformatics & Computational Biology | R Programming
The Genomics Research and Technology Hub conducted a workshop on Computational Biology and R Programing. The GRT Hub is working with Eduard Mas, PhD, in the Fleischman laboratory, to bring you an introductory course in R. It will take you from start up to packages including graphical displays and beyond to package development. (This is…
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