When our services have provided data that will be used in a manuscript, we would appreciate acknowledgement of the shared instrumentation grants and support from the Chao Comprehensive Cancer Center at UCI, Complexity, Cooperation and Community in Cancer and the Skin Biology Resource-Based Center at UCI.
The following publications have acknowledged these services and support:
How to Acknowledge the GRT in your Publications
| Publications |
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| Childs, J.E., Morabito, S., Das, S., Santelli, C., Pham, V., Kusche, K., Vera, V.A., Reese, F., Campbell, R.R., Matheos, D.P., Swarup, V., and Wood. M.A. Relapse to cocaine seeking is regulated by medial habenula NR4A2/NURR1 in mice. (2024) Cell Rep. 2024 Mar 26;43(3):113956. |
| Chea, S., Kreger, J., Lopez-Burks, M.E., Laclean, A.L., Lander, A.D., and Calof, A.L. Gastrulation-stage gene expression in Nipbl+/- mouse embryos foreshadows the development of syndromic birth defects. (2024) Sci Adv. 2024 Mar 22; 10(12): eadl4239. |
| Chen, Z., Snetkova, V., Bower, G., Jacinto, S., Clock, B., Dizehchi, A., Barozzi, I., Mannion, B.J., Alcaina-Caro, A., Lopez-Rioz, J., Dickel, D.E., Visel, Z., Pennacchio, L.A., and Kvon, E.Z. Increased enhancer-promoter interactions during developmental enhancer activation in mammals. (2024) Nat Genet. 2024 Mar 20. doi: 10.1038/s41588-024-01681-2 |
| Kastenschmidt, J.M., Schroers-Martin, J.G., Sworder, B.J., Sureshcandra, S., Khodadoust, M.S., Liu, C.L., Olsen, M., Kurtz, D.M., Diehn, M., Wagar, L.E., and Alizadeh, A.A. A human lymphoma organoid model for evaluating and targeting the follicular lymphoma tumor immune microenvironment. (2024) Cell Stem Cell. 2024 Mar 7;31(3):410-420.e4. |
| Mendez Luque, L. F., Avelar-Barragan, J., Nguyen H., Nguyen J., Soyfer, Eli M., Liu, J., Chen, J. H., Mehrotra, N., Huang, X., Kosiorkek, H. E., Dueck, A., Himstead, A., Heide, E., Lem, M., El Alaoui, K., Mas, E., Scherber R. M., Mesa, R. A., Whiteson, K. L., Odegaard, A., and Fleischman, A. G. The NUTRIENT Trial (NUTRitional Intervention among myEloproliferative Neoplasms): Results from a Randomized Phase I Pilot Study for Feasibility and Adherence. Cancer Res Commun. 2024 Mar 5;4(3):660-670. |
| Kong, X., Nguyen, N.V., Li, Y., Sakr, J.S., Williams, K., Sharifi, S., Chau, J., Bayrakci, A., Mizuno, S., Takahashi, S., Kiyono, T., Tawil, R., Mortazavi, Ali., and Yokomori, K. Engineered FSHD mutations results in D4Z4 heterochromatin disruption and feedforward DUX4 network activation. (2024) iScience. 2024 Apr 19; 27(4): 109357. |
| Sanchez, A., Ortega, P., Sakhetemani, R., Manjunath, L., Oh, S., Bournique, E., Becker, A., Kim, K., Durfee, C., Temiz, N.A., Chen, X.S., Harris, R.S., Lawrence, M.S., and Buisson, R. Mesoscale DNA features impact APOBEC3A and APOBEC3B deaminase activity and shape tumor mutational landscapes. (2024) Nat Commun. 2024; 15: 2370. |
| Hicks, M.R., Saleh, K.K., Clock, B., Gibbs, D.E., Yang, M., Younesi, S., Gane, L., Guiterrez-Garcia, V., Xi, H., and Pyle, A.D. Regenerating human skeletal muscle forms an emerging niche in vivo to support PAX7 cells. (2024) Nat Cell Biol. 2024 Feb;26(2):306. |
| Watson, S.J., Arisdakessian, C., Petelo, M., Kellipuleole, K., Tachera, D.K., Okuhata, B.K. and Frank, K.L. Groundwater microbial communities reflect geothermal activity on volcanic island. (2024) Geobiology 22e12591 |
| Liu, X., Liu, Z., Morgan, T.R., and Norden-Krichmar, T.M., Single-cell transcriptomics of peripheral blood mononuclear cells indicates impaired immune and inflammatory responses in alcohol-associated hepatitis. (2024) Hum Immunol . 2024 Jan;85(1):110735. |
| Hachey, S.J., Hatch, C.J., Gaebler, D., Mocherla, A., Nee, K., Kessenbrock, K., and Hughes, C.C.W. Targeting tumor-stromal interactions in triple-negative breast cancer using a human vascularized micro-tumor model. (2024) Breast Cancer Res. 2024 Jan 5;26(1):5. |
| Listopad S, Magnan C, Day LZ, Asghar A, Stolz A, Tayek JA, Liu, Z-X, Jacobs JM, Morgan TR and Norden-Krichmar TM Identification of integrated proteomics and transcriptomics signature of alcohol-associated liver disease using machine learning. (2024) PLOS Digital Health 3(2): e0000447. |
| Liu, L., Yu, A.M., Wang, X., Soles, L.V., Teng, X., Chen, Y., Yoon, Y., Sarkan, K.S.K., Valdez, M.C., Linder, J., England, W., Spitale, R., Yu, Z., Marazzi, I., Qiao, F., Li, W., Seelig, G., and Shi, Y. The anticancer compound JTE-607 reveals hidden sequence specificity of the mRNA 3' processing machinery. (2023) Nat Struct Mol Biol. 2023 Dec;30(12):1947-1957. |
| Hollingsworth, E. W., Liu, T. A., Jacinto, S. H., Chen, C. X., Alcantara, J. A., and Kvon, E. Z. Rapid and quantitative functional interrogation of human enhancer variant activity in Live Mice. bioRxiv. 2023 Dec 10:2023.12.10.570890. |
| Holley, S. M., Reidling, J. C., Cepeda, C., Wu, J., Lim, R. G., Lau, A., Moore, C>, Miramontes, R., Fury, B., Orellana, I., Neel, M., Coleal-Bergum, D., Monuki, E. S., Bauer, G., Meshul, C. K., Levine, M. S., and Thompson, L. M. Transplated human neural stem cells rescue phenoypes in zQ175 Huntington's disease mice and innervate the striatum Mol Ther. 2023 Dec 6;31(12):3545-3563. |
| Pham, P.D., Lu, H., Han, H., Zhour, J.J. Madan, A., Wang, W., Murre, C. and Cho, K.W.Y. Transcriptional network governing extraembryonic endoderm cell fate choice. (2023) Developmental Biology 502: 20-37 |
| Charney, R.M., Prasad, M.S., Juan-Sing, C., Patel, L.J., Hernandez, J.C., Wu, J., and García-Castro, M.I. Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation. (2023) Stem Cell Reports . 2023 Nov 14;18(11):2254-2267. |
| Smith, J.G., Koronowski, K.B., Mortimer, T., Sato, T., Greco, C.M., Petrus, P., Verlande, A., Chen, S., Samad, M., Deyneka, E., Mathur, L., Blazev, R., Molendijk, J., Kumar, A., Deryagin, O., Vaca-Dempere, M., Sica, V., Liu, P., Orlando, V., Parker, B.L., Baldi, P., Patrick-Simon, W., Jang, C., Masri, S., Bentiah, S.A., Muñoz-Cánoves, P., and Sassone-Corsi, P. Liver and Muscle Circadian Clocks Cooperate to Support Glucose Tolerance in Mice. (2023) Cell Rep. Author manuscript; available in PMC 2023 Oct 23. |
| Milovic, A., Duong, J. V., and Barbour, A. G. The white-footed deermouse, an infection-tolerant reservoir for several zoonotic agents, tempers interferon responses to endotoxin in comparison to the mouse and rat. 2023 Oct 12:2023.06.06.543964. |
| Doratt, B.M., Sureshchandra, S., True, H., Rincon, M., Marshall, N.E., and Messaoudi, I. Mild/asymptomatic COVID-19 in unvaccinated pregnant mothers impairs neonatal immune responses. (2023) JCI Insight. 2023 Oct 9; 8(19): e172658. |
| Lewis, S.A., Doratt, B.M., Qiao, Q., Blanton, M., Grant, K.A., and Messaoudi, M. Integrated single cell analysis shows chronic alcohol drinking disrupts monocyte differentiation in the bone marrow. (2023) Stem Cell Reports. 2023 Sep 12; 18(9): 1884–1897 |
| Le, N., Heras, J., Herrera, M.J., German, D.P., and Crummett, L.T. The genome of Anoplarchus purpurescens (Stichaeidae) reflects its carnivorous diet. (2023) Mol Genet Genomics. 2023 Nov;298(6):1419-1434 |
| Harb, J. F>, Christensen, C. L., Kan, S., Rha, A. K., Andrade-Heckman, P., Pollard, L., Steet, R., Huang, J. Y., and Wang, R. Y. Base editing corrects the common Salla disease SLC17A5 c.115C>T variant. Mol Ther Nucleic Acids. 2023 Aug 26:34:102022. |
| Rankins, D. R., Herrera, M. J., Christensen M. P., Chen, A., Hood, N. Z., Heras, J., and German, D. P. When digestive physiology doesn't match "diet": Lumpenus sagitta (Stichaeidae) is an "omnivore" with a carnivorous gut. Comp Biochem Physiol A Mol Integr Physiol. 2023 Nov:285:111508. |
| Ziegler, M. E., Khabaz, K., Khoshab, N., Halaseh, F. F., Chnari, E., Chen, S., Baldi, P., Evans, G. R. D., and Widgerow, A. D. Combining Allograft Adipose and Fascia Matrix as an Off-the-Shelf Scaffold for Adipose Tissue Engineering Stimulates Angiogenic Responses and Activates a Proregenerative Macrophage Profile in a Rodent Model. Ann Plast Surg. 2023 Aug 1;91(2):294-300. |
| Barbour, A. G., Duong, J. V., and Long A. D. Lyme Disease Agent Reservoirs Peromyscus leucopus and P. maniculatus Have Natively Inactivated Genes for the High-Affinity Immunoglobulin Gamma Fc Receptor I (CD64). Pathogens . 2023 Aug 18;12(8):1056. |
| Neubert, E.N., DeRogatis, J.M, Lewis, S.A. Viramontes, K.M., Ortega, P., Hernriquez, M.L., Buisson, R., Messaoudi, I. and Tinoco, R. HMGB2 regulates the differentiation and stemness of exhausted CD8+ T cells during chronic viral infection and cancer (2023) Nature Communications 14: 5631 |
| Nakahara, S., Male, A.G., Turner, J.A., Calhoun, V.D., Lim, K.O., Mueller, B.A., Bustillo, J.R., O’Leary, D.S., Voyvodic, J., Belger, A., Preda, A., Mathalon, D.H., Ford, J.M., Guiffanti, G., Macciardi, F., Potkin, S.G. and van Erpk T.G.M. Auditory oddball hypoactivation in schizophrenia. (2023) Psychiatry Research Neuroimaging epub August 28 |
| Kastenschmidt, J.M., Sureschandra, S., Jain, A., Hernandez-Davies, J.E., de Assis, R., Wagoner, Z.W., Sorn, A.M., Mitul, M.T., Benchorin, A.I., Levendosky, E., Ahuja, G., Zhong, Q., Trask, D., Boeckmann, J., Nakajima, R., Jasinskas, A., Saligrama, N., Davies, D.H. and Wagar, L.E. Influenza vaccine format mediates distinct cellular and antibody response in human immune organoids. (2023) Immunity 56:1910-1926 |
| Kim, J., Chun, Yl, Ramirez, CB., Hoffner, L.A., Jung, S., Jang, K.H., Rubtsova, V.I., Jang, C. and Lee, G. MAPK13 stabilization via m6A mRNA modification limits anticancer efficacy of rapamycin. (2023) Journal of Biological Chemistry 299(9): 105175 |
| Hakiem, O.R., Rizvi, S.M.A., Ramirez, C and Tan, M. Euo is a developmental regulator that represses late genes and activates midcycle genes in Chlamydia trachomatis. (2023) Microbial Pathogenesis epub August 1 |
| Lin, L, Jung, K-M., Lee, H-L, Le, J., Colleluori, G., Wood, C., Palese, F., Squire, E., Ramirez, J., Su, S., Torrens, A., fotio, Yl, Tang, L., Yu, C., Yang, Q., Huang, L., DiPatrizio, N., Jang, C., Cinti, S. and Piomelli, D. Adolescent exposure to low-dose THC disrupts energy balance and adipose organ homeostatsis in adulthood. (2023) Cell Metabolism 35: 1227-1241 |
| Kumar, T., Nee, K., Wei, R., He, S., Nguyen, Q.H., Bai, S., Blake, K., Pein, M., Gong, Y., Sei, E., Hu, M., Cassent, A.K., Thennavan, A., Li, J., Tran, T., Chen, K., Nilges, B., Kashikar, N., Braubach, O., Cheikh, B.B., Nikuline, N., Chen, H., Teshome, M., Menegaz, B., Javaid, H., Nagi, C., Montalvan, J., Lev, T., Mallya, S., Tifrea, D.F., Edwards, R., Lin, E., Parajuli, R., Hanson, S., Winoccur, S., Thompson, A., Lim, B., Lawson, D.A., Kessenbrock, K and Navin, N. A spatially resolved single-cell genomic atlas of the adult human breast. (2023) Nature 620:181 |
| Coulis, G., Jaime, D., Guerrero-Juarez, C., Kastenschmidt, J.M., Farahat, P.K., Nguyen, Q., Pervolarakis, N., McLinden, K., Thurlow, L., Movadedi, S., Hughes, B.S., Duarte, J., Sorn, A., Montoya, E., Mozaffar, I., Dragan, M., Othy, S., Joshi, T., Han, C.P., Kimonis, V., MacLean, A.A., Nie, Q., Wallace, L.M, Harper, S.Q., Mosaffar, T., Hogarth, M.W., Bhattacharya, J., Jaiswal, J.K., Golann, D.R., Su, Q., Kessenbrock, K., Stec, M., Spencer, J.J., Zamudio, J.R. and Villalta, S.A. Single-cell and spatial transcriptomics identify a macrophage population associated with skeletal muscle fibrosis. (2023) Science Advances 9:eadd9984 |
| Trinh, A. Huang, Y., Shao, H., Ram, A., Morival, J., Wang, J., Chung E.J. and Downing, T.L. Targeting the ADPKD methylome using nanoparticle-mediated combination therapy. (2023) APL Bioengineering 7: 026111 |
| Greilach, S.A., McIntyre, L.L., Nguyen, Q.H., Silva, J., Kessenbrock, K., Lane, T.E., and Walsh, C.M. Presentation of Human Neural Stem Cell Antigens Drives Regulatory T Cell Induction. (2023) J Immunol. 2023 Jun 1;210(11):1677-1686. |
| Stabell, A.R., Lee, G.E., Jia, Y., Wong, K.N., Wang, S., Ling, J., Nguyen, S.D., Sen, G.L., Nie, Q., and Atwood, S.X. Single-cell transcriptomics of human-skin-equivalent organoids. (2023) Cell Rep. 2023 May 30;42(5):112511. |
| Morales-Cruz, A., Aguirre-Liguori, J., Massonnet, M., Minio, A., Zaccheo, M., Cochetel, N., Walker, A., Riaz, S., Zhou, Y., Cantu, D., and Gaut, B.S. Multigenic resistance to Xylella fastidiosa in wild grapes (Vitis sps.) and its implications within a changing climate. (2023) Commun Biol. 2023 May 30;6(1):580. |
| Reese, F., Williams, B., Balderrama-Gutierrez, G., Wyman, D., Çelik M. H., Rebboah, E., Rezaie, N., Trout, D., Razavi-Mohseni, M., Jiang, Y., Borsari, B., Morabito, S., Liang, H. Y., McGill, C. J., Rahmanian, S., Skar, J., Jiang, S., Zeng, W., Carvalho, K., Weimer, A.K., Dionne, L. A., McShane, A., Bedi, K., Elhajjayjy, S. I., Upchurch, S., Jou, J., Youngworth, I., Gabdank I., Sud, P., Jolanki, O., Strattan, S., Kagda, M. S., Snyder, M. P., Hitz, B. C., Moore, J. E., Weng, Z., Bennett, D., Reinholdt, L., Ljungman, M. Beer, M. A., Gerstein, M. B., Pachter, L., Guigó, R., Wold, B. J., and Mortazavi, A. The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity. bioRxiv 2023 May 16:2023.05.15.540865 |
| Doratt, B. M., Sureshcandra, S., True, H., Rincon, M., Marshall, N., and Messaoudi, I. Mild/Asymptomatic Maternal SARS-CoV-2 Infection Leads to Immune Paralysis in Fetal Circulation and Immune Dysregulation in Fetal-Placental Tissues. 2023 May 11:2023.05.10.540233. |
| Batarseh, T.N., Batarseh, S.N., Rodríguez-Verdugo, A., and Gaut, B.S. Phenotypic and Genotypic Adaptation of Escherichia coli to Thermal Stress is Contingent on Genetic Background. (2023) Mol Biol Evol. 2023 May 2;40(5):msad108. |
| Sureshchandra, S., Doratt, B.M., True, H., Mendoza, N., Rincon, M., Marshall., N.E., Messaoudi, I. Multimodal profiling of term human decidua demonstrates immune adaptations with pregravid obesity. (2023) Cell Rep. 2023 Jul 25; 42(7): 112769. |
| Miyoshi, E., Morabito, S., Henningfield, C. M., Rahimzadeh N., Shabestari, S. K., Das, S., Michael, N., Reese, F., Shi, Z., Cao, Z., Scarfone, V., Arreola, M. A., Lu, J., Wright, S., Silva, J., Leavy, K., Lott, I. T., Doran, E., Young, W. H., Shahin, S., Perez-Rosendahl, M., Head, E., Green, K. N., and Swarup, V. Spatial and single-nucleus transcriptomic analysis of genetic and sporadic forms of Alzheimer's Disease. bioRxiv 2023 Jul 26:2023.07.24.550282. |
| Sato, S., Hishida, T., Kinouchi, K., Hatanaka, F., Li, Y., Nguyen, Q., Chen, Y., Wang, P.H., Kessenbrock, K., Li, W., Izpisua Belmonte, J.C. and Sassone-Corsi, P. The circadian clock CRY1 regulates pluripotent stem cell identity and somatic cell reprogramming. (2023) Cell Reports 42: 112590 |
| Das, B.K., Kannan, A., Velasco, G.J., Junika, M.D., Lambrecht, N., Nguyen, Q., Zhao, H., Wu, J. and Gao L. Single-cell dissection of Merkel cell carcinoma heterogeneity unveils transcriptomic plasticity and therapeutic vulnerabilities. (2023) Cell Reports Medicine 4: 101101 |
| Dragan, M., Chen, Z., Li, Y.m, Le, J., Sun, P., Haensel, D., Sureshchandra, S., Pham, A., Lu, E., Pham, K.T., Verlande, A., Vu, R., Gutierrez, G., Li, W., Jang, C., Masri, S. and Dai, X. Ovo1/2 loss-induced epidermal defects elicit skin immune activation and alter global metabolism. (2023) EMBO Reports 24:e56214 |
| Chen, J.K., Wiedemann, J., Nguyen, L., Lin, Z., Tahir, M., Hui, C-C., Plikus, M.V. and Andersen, B. IRX5 promotes DNA damage repair and activation of hair follicle stem cells. (2023) Cell Reports 18: 1227-1243 |
| Segaliny, A.I., Jayaraman, J., Chen, X., Chong, J., Luxon, R., Fung, A., Fu, Q., Jiang, X., Rivera, R., Ma, X., Ren, Ci., Zimak, J., Hedde, P.N., Shang, Y., Wu, G., and Zhao, W. A high throughput bispecific antibody discovery pipeline. (2023) Commun Biol. 2023 Apr 7;6(1):380. |
| DeRogatis, J.M., Neubert, E.N., Viramontes, K.M., Henriquez, M.L., Nicholas, D.A. and Tinoco, R. Cell-intrinsic CD38 expression sustains exhausted CD8+ T cells by regulating their survival and metabolism during chronic viral infection. (2023) Journal of Virology epub April 11 |
| Gupta, M., Wang, J., Garfio, C. M., Vandewalle, A., and Spitale, R. C. Cycloaddition enabled mutational profiling of 5-vinyluridine in RNA. Chem Commun (Camb). 2023 Mar 14;59(22):3257-3260. |
| Stabell, A. R., Lee, G. E., Jia, Y., Wong, K. N., Wang, S., Ling, J., Nguyen, S. D., Sen, G. L. Nie, Q., and Atwood, S. X. Single-cell transcriptomics of human-skin-equivalent organoids. Cell Rep. 2023 May 30;42(5):112511. |
| Nee, K., Ma, D., Nguyen, Q.H., Pein, M., Pervolarakis, N., Insua-Rodriguez, J., Gong, Y., Hernandez, G., Alshetaiwi, H., Williams, J., Rauf, M., Dave K.R., Boyapati, K., Hasnain, A., Calderon, C., Markaryan, A., Edwards,R., Lin, E., Parajuli, R., Zhou, P., Nie, Q., Shalabi, S., LaBarge, M.A. and Kessenbrock, K. Preneoplastic stromal cells promote BRCA1-mediated breast tumorigenesis. (2023) Nature Genetics epub March 13 |
| Dolinko, A.H., Chwa, M., Schneider, K., Singh, M.K., Atilano, S., Wu, J. and Kenney, M.C. Hypoxia-induced transcripional differences in African and Asian versus European diabetic cybrids. (2023) Scientific Reports 13:3818 |
| Workman, M.J., Lim, R.G., Wu, J., Frank, A., Ornelas, L., Panther, L., Galvez, E., Perez, D., Meepe, I., Lei, S., Valencia, V., Gomez, E., Liu, C., Moran, R., Pinedo, L., Tsitkov, S., Ho, R., Kaye, J.A., the Answer ALS Consortium, Thompson, T., Rothstein, J.D., Finkbeiner, S., Fraenkel, E., Sareen, D., Thompson, L.M. and Svendsen, C.N. Large-scale differentiation of iPSC-derived motor neurons from ALS and control subjects. (2023) Neuron 111:1-14 |
| Urban, L.A., Li, J., Gundogdu, G., Trinh, A., Shao, H., Nguyen, T., Mauney, J.R. and Downing, T.L. DNA methylation dynamics during esophageal epithelial regeneration following repair with accellular silk fibroin grafts in rat. (2023) Advanced Biology 2000160 |
| Manjunath, L., Oh, S., Ortega, P., Bouin, A., Bournique, E., Sanchez, A., Martensen, P.M., Auerbach, A.A., Becker, J.T., Seldin, M., Harris, R.S., Semler, B.L., and Buisson, R. APOBEC3B drives PKR-mediated translation shutdown and protects stress granules in response to viral infection. (2023) Nat Commun. 2023; 14: 820 |
| Raus, A.M., Fuller, T.D., Nelson, N.e., Valientes, D.A., Bayat, A. and Ivy, A.S. Early-life exercise primes the murine neural epigenome to facilitate gene expression and hippocampal memory consolidation. (2023) Communications Biology 6:18 |
| Yang, J.C., Jacobs, J.P, Hwang, M., Sabui, S., Liang, F., Said, H.M. and Skupsky, J. Biotin deficiency induces intestinal dysbiosis associated with inflammatory bowel disease-like phenotype. (2023) Nutrients epub January 4 |
| Ren, M. and Lotfipour, S. Antibotic knockdown of gut bacteria sex-dependently enhances intravenous fentanyl self-administration in adult Sprague Dawley rats. (2023) International Journal of Molecular Sciences 24: 409 |
| Reyes-Ortiz, A.M., Abud, E.M., Burns, M.S., Wu, J., Hernandez, S.J., McClure, N., Wang, K.Q., Schulz, ClJ., Miramontes, R., Lau, Al, Neethu, M., Miyoski, E., Van Vactor, D., Reidling, J.C., Blurton-Jones, M., Swarup, V., Poon, W.W., Lim, R.G. and Thompson, L.M. Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits. (2023) iScience 26:105732 |
| Chadarevian, J.P., Lombroso, S.I., Peet, G.C., Hasselmann, J., Tu, Cl, Marzan, D.E., Capochi, J., Purnell, FS. Nemec, K.M., Lahian, A., Escobar, A., England, W., Chaluvadi, S., O’Brien, C.A., Yaqoob, F., Aisenberg, W.H., Pantiagua, M.P., Bennett, M.L.m, Davtyan, D., Spitale, R.C., Blurton-Jones, M. and Bennett, F.C. Engineering an inhibitor-resistant human CSF1R variant for microglia replacement. (2023) Journal of Experimental Medicine 220(3): e20220857 |
| Rothman, J. A., Saghir, A., Chung, Seung-Ah., Boyajian, N., Dinh, T., Kim, J., Oval, J., Sharavana, V., York, C., Zimmer-Faust, A. G., Langlois, K., Steele, J. A., Griffith, J. F., and Whiteson, K. L. Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020-21 reveals widespread transcription of antibiotic resistance genes. Water Res. 2023 Feb 1:229:119421. |
| Sureshchandra, S., Doratt, B.M., Mendza, N., Varlamov, O., Rincon, M., Marshall, N.E., and Messaoudi, I. Maternal obesity blunts antimicrobial responses in fetal monocytes. (2023) eLife. 2023; 12: e81320. |
| Thone, M.N., Chung, J.Y., Ingato, D., Lugin, M.L., and Kwon, Y.J. Cell-free, Dendritic Cell-mimicking Extracellular Blebs for Molecularly Controlled Vaccination. (2023) Adv Ther (Weinh). 2023 Jan;6(1):2200125. |
| Hernandez, S.J., Lim, R.G., Onur, T., Dane, M.A., Smith, R., Wang, K., Jean, G. E-H., Devlin, K., Miramontes, R., Wu, J., Casale, M., Kilburn, D., Heiser, L.M., Korkola, J.E., Van Vactor, D., Botas, J, Thompson-Peer, K.L. and Thompson, L.M. An altered extracellular matrix-integrin interface contributes to Huntington’s disease-associated CNS dysfunction in glial and vascular cells. (2022) Human Molecular Genetics epub Dec 22 |
| Hjelm, B.E., Ramiro, C., Rollins, B.L., Omidsalar, A.A., Gerke, D.S., Das, S.C., Sequiera, A., Morgan, L., Schatzberg, A.F., Barchas, J.D. Lee, F.S., Myers, R.M., Watson, S.J., Akil, H., Bunney, W.E. and Vawter, M.P. Large common mitochondrial DNA deletions are associated with a mitochondrial SNP T14798C near the 3′ breakpoints. (2022) Complex Psychiatry epub November 14 |
| Raus, A.M., Nelson, N.E., Fuller, T.D. and Ivy, A.S. “SIT” with Emx1-NuTRAP Mice: Simultaneous INTACT and TRAP for paired transcriptomic and epigenetic sequencing. (2022) Current Protocols 2: e570 |
| Sami, J.D., Spitale, R.C. and Cleary, M.D. mRNAs encoding neurodevelopmental regulators have equal N6-methyladenosine stoichiometry in Drosophila neuroblasts and neurons. (2022) Neural Development 17:9 |
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